At the Czerka Evacuation Site, the Mercenary Commander says: "Falt hired me to keep everyone out of the Restoration Zone... you in particular." If you go back to the Citadel Station's Cantina after recovering the Ebon Hawk, Corrun Falt is still there. Since you can't talk to him about the mercenaries wouldn't it be better if he was no longer there? Or is there cut content that contains Corrun Falt talking about the mercenaries?
After T3-M4 leaves the droid warehouse and after the Zhug Brother kills the Gran, Mira's subtitles show: "}Uh-oh... we've got insects." The "}" shouldn't be there.
In the HK Factory, if HK-47 uploads his core to the HK-51s, then immediately shuts down their production line, and never activates them, they still help HK-47 on Malachor. If they were not activated shouldn't the HK-51s not be there?
The cinematic of the Sith ships approaching Telos is shown before the HK Factory and again right before the Battle of Telos.