I had the same issue, so I looked around and found the patch. I did as it said for the install, I then went back to a save from before setting foot on Nar Shaddaa and started over. But once Atton, Mira, and T3 battle their way to Tienn to change my transponder codes, I select my team to board Goto's Yacht, the movie scene plays showing the yacht coming in behind the Ebon Hawk, but then I get the conversation of the Zhug Brothers in the cantina discussing capturing the Ebon Hawk even though they have already tried (and failed). Then it shows Atton, Mira, and T3 standing outside the Ebon Hawk, I can't go in the ship, to the docks, refugee sector, or the cantina. Cheats wont work, never have, so warping is out. What should I do?